BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F12LP1|AL425279
(1018 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig330 1923 0.0
>3x_Contig330
Length = 1954
Score = 1923 bits (968), Expect = 0.0
Identities = 1006/1016 (99%), Gaps = 3/1016 (0%)
Strand = Plus / Minus
Query: 1 atactcgtaaaagagccgtgcaatcttgagccgattatcagtgttggtagtaaaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 atactcgtaaaagagccgtgcaatcttgagccgattatcagtgttggtagtaaaatatgt 1392
Query: 61 cgaaagcaattcattaattaatgaaggcaaagccttctcgagtatgagaggatcaacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 cgaaagcaattcattaattaatgaaggcaaagccttctcgagtatgagaggatcaacctc 1332
Query: 121 gaag-gttgaagcactcctattgtctcttcgaaattggtgaaatcggacatgccatgttg 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 gaagagttgaagcactcctattgtctcttcgaaattggtgaaatcggacatgccatgttg 1272
Query: 180 cagctttcgtataaggacgtctttagagagtcgagctgttgatgtcatactattcgagtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 cagctttcgtataaggacgtctttagagagtcgagctgttgatgtcatactattcgagtg 1212
Query: 240 ttatgcttggttgtggtgggagaagggattcttgaggtcttttgcaagctttcaataaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 ttatgcttggttgtggtgggagaagggattcttgaggtcttttgcaagctttcaataaaa 1152
Query: 300 gggtttatcttttcctagcaattgtgtttaaaactcttcaaaaatcagaagtgaacaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gggtttatcttttcctagcaattgtgtttaaaactcttcaaaaatcagaagtgaacaaga 1092
Query: 360 atatggcataaagatactgtaatgaagatct-ctttaatgcaataaagtgtttggaatga 418
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1091 atatggcataaagatactgtaatgaagatcttctttaatgcaataaagtgtttggaatga 1032
Query: 419 caatcgatattggtagtattgagattatctatcatgtctataaattgagatgatattgaa 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1031 caatcgatattggtagtattgagattatctatcatgtctataaattgagatgatatggaa 972
Query: 479 tttacttttttccttttcattgttgtcaaatcaagattataaaatccaatgtcaatttaa 538
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 971 tttacttttt-ccttttcattgttgtcaaatcaagattataaaatccaatgtcaattgaa 913
Query: 539 aatataaaatctatgaaggaaagcgatgacatagaagatgcataaattatcaatgttagt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 aatataaaatctatgaaggaaagcgatgacatagaagatgcataaattatcaatgttagt 853
Query: 599 caaattttacataaaagcaatctcaaattaacaacgaatctaagcgactgttcacttcat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 caaattttacataaaagcaatctcaaattaacaacgaatctaagcgactgttcacttcat 793
Query: 659 cgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatgtctttgataatgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatgtctttgataatgg 733
Query: 719 tagcacctttttcatagtcactaggttcgttgaaaacctgaacagaaaatctaataaaca 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tagcacctttttcatagtcactaggttcgttgaaaacctgaacagaaaatctaataaaca 673
Query: 779 agtgactgttgttaatttggaatggcgcataacatttatactctgcgagcatgatcttat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agtgactgttgttaatttggaatggcgcataacatttatactctgcgagcatgatcttat 613
Query: 839 cacatttactcttaaagtttaggaaataaattctatcagtactcatcttttcaatgagat 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cacatttactcttaaagtttaggaaataaattctatcagtactcatcttttcaatgagat 553
Query: 899 gttgacattmmgatttaatcggtaattctatacagaataatccgggtgaacgtaaagaat 958
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gttgacattccgatttaatcggtaattctatacagaataatccgggtgaacgtaaagaat 493
Query: 959 tagtcgagttttcaagtagaacagatccttggccaaaaactmcaaaaatctttgga 1014
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 492 tagtcgagttttcaagtagaacagatccttggccaaaaacctccaaaatctttgga 437
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8701
Number of Sequences: 1807
Number of extensions: 8701
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 1018
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1002
effective length of database: 10,329,639
effective search space: 10350298278
effective search space used: 10350298278
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)